rnaseq_pipeline

Rbedtoolsbioinformatics-pipelinegenomicsgffilluminajupyter-notebookngs-analysisnotebookpanelpipelineread-countsrna-seq-analysisrnaseqrsemsalmonsnakemakesnpefftranscript

RNA-seq pipeline in R/Bash enables QC, alignment, read counting, and differential expression using Bioconductor; reproducible workflow on Ubuntu with Conda. ๐Ÿ™